Alfa Cytology - Cancer Drug R&D Services

CRISPR/Cas Gene Editing Vector Services

Inquiry

Alfa Cytology offers comprehensive CRISPR/Cas gene editing vector services designed to provide precise genome editing tools for your research projects. Leveraging an advanced CRISPR vector construction platform and optimized design strategies, our senior scientists are dedicated to developing highly efficient and specific gene editing vectors tailored to your specific research needs. We provide full-process support ranging from gene knockout/knock-in and transcriptional regulation to genome-wide screening, ensuring customized solutions at every critical step of your project.

Introduction to CRISPR/Cas Gene Editing Vector

The CRISPR/Cas system is currently the most powerful genome editing tool, utilizing a guide RNA (sgRNA) to direct Cas proteins to induce double-strand breaks (DSBs) at specific genomic loci, which are then repaired by endogenous non-homologous end joining (NHEJ) or homology-directed repair (HDR) pathways to achieve gene knockout, knock-in, or point mutation. The NHEJ pathway predominantly results in gene knockout via the introduction of frameshift mutations, whereas the HDR pathway enables precise knock-in or point mutation when a donor template is provided. Furthermore, by employing catalytically dead Cas9 (dCas9) fused to transcriptional activation or repression effector domains, CRISPR technology also enables transcriptional activation (CRISPRa) or interference (CRISPRi), offering reversible regulatory tools for gene function studies, particularly suited for essential gene functional analysis and the dissection of complex gene regulatory networks. In oncology research, CRISPR/Cas vectors are widely utilized in applications such as functional genetic screening, tumor driver gene validation, drug resistance model construction, and synthetic lethal target discovery. Depending on the research objectives, the CRISPR/Cas system can be employed to generate permanent gene knockout cell lines (via NHEJ-mediated frameshift mutations), precise gene knock-in models (via HDR-mediated site-specific integration), or reversible transcriptional regulation of endogenous genes through CRISPRi/a.

Fig. 1 CRISPR screening and mutagenesis workflows.Fig. 1 Different workflows used in CRISPR screening and mutagenesis. (Chehelgerdi M, et al.; 2024)

Our Services

Our CRISPR/Cas gene editing vector services support a wide range of Cas9 variants, vector backbones, and delivery formats, accommodating various editing types including gene knockout, knock-in, point mutation, and transcriptional regulation.

sgRNA Design and Vector Construction

Based on your research objectives, we design and construct CRISPR vectors carrying sgRNA sequences. Our services include:

  • sgRNA target design utilizing advanced algorithms (3–5 sgRNAs per gene).
  • Off-target effect prediction and evaluation.
  • sgRNA duplex annealing and vector ligation.
  • A broad selection of Cas9 variants: SpCas9, SaCas9, Cas9n (nickase), and dCas9.
  • Multiple vector backbones: conventional plasmids, lentiviral vectors (e.g., lentiCRISPR v2), and AAV vectors.
  • Selection markers: Puromycin, Blasticidin, Neomycin, GFP, and mCherry.
  • Full-length sequencing validation to ensure 100% accuracy of the inserted sequence.

Vector Functional Validation

  • All CRISPR vectors undergo rigorous functional validation, including:
  • Sequencing confirmation of sgRNA insert accuracy.
  • Editing efficiency testing in standard cell lines (via T7EI assay or sequencing).
  • Provision of a comprehensive editing efficiency evaluation report.

Available CRISPR Systems

System Editing Type Features Best Use Cases
SpCas9 Knockout / Knock-in Classic system; NGG PAM; high efficiency Routine gene knockout; cell line engineering
SaCas9 Knockout / Knock-in Smaller size; NNGRRT PAM AAV packaging; sizeconstrained applications
Cas9n (nickase) Knock-in Dual-nicking strategy; lower offtarget rates Knockin requiring high specificity
dCas9-CRISPRi Transcriptional repression No DNA cleavage; reversible silencing Essential gene studies; gene regulatory network analysis
System Editing Type Features Best Use Cases

We also offer gene-edited cell line construction services, including transfection/transduction, monoclonal screening, editing efficiency validation (T7EI/sequencing), and delivery of the final cell line.

Specifications

Parameter Specification
Cas9 variants SpCas9, SaCas9, Cas9n (nickase), dCas9
Vector backbones pX series, lentiCRISPR v2, pAAV-CRISPR, etc.
sgRNA number 3–5 sgRNAs designed per gene
Selection markers Puromycin, Blasticidin, Neomycin, GFP, mCherry
Delivery formats Plasmid, lentivirus, AAV
Delivery format Plasmid DNA, glycerol stocks, sequencing reports, editing efficiency validation reports
Turnaround time 2–4 weeks

Applications of CRISPR/Cas Vectors in Cancer Research

Whole-Genome CRISPR Screening

Using lentiviral CRISPR library vectors for genome-wide functional screening to systematically identify tumor dependency genes and synthetic lethal targets. The construction and delivery of large-scale libraries are highly dependent on the lentiviral vector system.

Functional Validation of Gene Knockout

Employing SpCas9 or SaCas9 vector systems to knock out candidate genes in tumor cell lines, systematically assessing their impact on phenotypes such as proliferation, migration, invasion, and evasion of apoptosis. The vector determines knockout efficiency and cellular fitness.

Functional Study of Point Mutations

Utilizing vectors carrying Cas9 and sgRNA, in combination with HDR repair templates, to introduce clinically relevant point mutations and evaluate their effects on protein function and cellular phenotypes. This process relies on vector delivery efficiency and the design of HDR donor elements.

Transcriptional Regulatory Network Studies

Using dCas9 vectors fused with transcriptional activation or repression effector domains (CRISPRa/i) to achieve reversible transcriptional regulation of endogenous genes, thereby dissecting gene regulatory networks and compensatory mechanisms within signaling pathways.

Establishment of Drug-Resistant Models

Employing lentiviral CRISPR vectors to knock out or knock in drug-resistance-associated genes in tumor cells, establishing drug-resistant cell models with well-defined genetic backgrounds. These models provide reliable cellular tools for combination therapy strategies and the development of resistance countermeasures.

In Vivo Gene Editing

Utilizing AAV-CRISPR vectors to achieve tissue-specific gene editing in vivo, assessing the roles of target genes in tumor growth, metastasis, and remodeling of the immune microenvironment. The choice of AAV serotype (e.g., AAV8 for liver targeting, AAV9 for brain targeting) directly determines the in vivo editing efficacy.

Workflow of CRISPR/Cas Gene Editing Vector Services

Project Consultation and Strategy Design

We discuss your research objectives, gene information, cell type, and editing requirements to design the optimal CRISPR vector construction and editing strategy.

sgRNA Design and Vector Construction

sgRNA target design, off-target prediction, annealing, ligation, and transformation are performed, followed by full-length Sanger sequencing verification.

Editing Efficiency Validation

The CRISPR vector is transfected into a standard cell line, and editing efficiency is assessed by T7EI assay or sequencing.

Delivery and Downstream Application Support

CRISPR plasmids, glycerol stocks, and validation reports are delivered, with seamless transfer to downstream services such as gene-edited cell line construction and in vivo editing studies.

Whether you are conducting whole-genome screening, validating a tumor driver gene, or building a drug-resistance model, Alfa Cytology delivers CRISPR/Cas vectors engineered for efficiency and specificity. From sgRNA design to editing efficiency validation, our team provides the technical foundation your cancer research demands. Please don't hesitate to contact us to discuss how we can support your next editing project

References

  1. Hillary VE, et al. CRISPR's impact on cancer: From fundamental models to clinical solutions. Life Sci. 2026;384:124087.
  2. Chehelgerdi M, et al. Comprehensive review of CRISPR-based gene editing: mechanisms, challenges, and applications in cancer therapy. Mol Cancer. 2024;23(1):9.

For research use only.

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